Abexinostat (PCI-24781), 99.21%

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Specifications:
Application Protein Biology
Storage Temperature -20°C
Product Type Proteins & Peptides Forms Solid
Product Brand Selleckchem
Product Grade Analytical grade Formula C21H23N3O5

Abexinostat, also known as PCI-24781 or CRA-024781, is a novel pan-histone deacetylase (HDAC) inhibitor with potent activity against multiple HDAC isoforms. It primarily targets HDAC1, with a reported Ki of 7 nM, and also shows activity against HDAC2, HDAC3/SMRT, HDAC6, and HDAC10. Abexinostat demonstrates greater than 40-fold selectivity against HDAC8 compared with HDAC1.

As an epigenetic research compound, Abexinostat is widely studied in cancer biology, chromatin regulation, apoptosis, DNA damage response, homologous recombination repair, and cell cycle regulation. It has been investigated in preclinical and clinical research settings, including Phase 1/2 studies.

Key Features

  • Novel pan-HDAC inhibitor
  • Potently targets HDAC1 with Ki = 7 nM
  • Active against HDAC2, HDAC3/SMRT, HDAC6, and HDAC10
  • Greater than 40-fold selectivity against HDAC8
  • Induces accumulation of acetylated histones and acetylated tubulin
  • Promotes p21 expression, PARP cleavage, and γH2AX accumulation
  • Studied in tumour cell proliferation, apoptosis, DNA damage, and homologous recombination research
  • Suitable for epigenetics, oncology, and cell signalling research
  • For research use only

Target Profile

TargetAssay TypeReported Activity
HDAC1Cell-free assayKi = 7 nM
HDAC3/SMRTCell-free assayKi = 8.2 nM
HDAC6Cell-free assayKi = 17 nM
HDAC2Cell-free assayKi = 19 nM
HDAC10Cell-free assayKi = 24 nM

Biological Activity

Abexinostat has demonstrated potent antitumour activity against a range of tumour cell lines, with reported GI50 values ranging from 0.15 µM to 3.09 µM. It has also shown antiproliferative activity in HUVEC endothelial cells, with a reported GI50 of 0.43 µM.

In cellular studies, Abexinostat treatment has been associated with:

Observed EffectResearch Relevance
Accumulation of acetylated histonesConfirms HDAC inhibition and chromatin modulation
Accumulation of acetylated tubulinIndicates HDAC6-related activity
Induction of p21 expressionSupports cell cycle regulation studies
PARP cleavageMarker associated with apoptosis research
γH2AX accumulationSupports DNA damage response studies
RAD51 transcriptional repressionRelevant to homologous recombination repair research
S-phase depletion and G2 cell cycle arrestUseful in cell cycle analysis
Caspase and ROS-dependent apoptosisRelevant to lymphoma and cancer cell death studies

In Vitro Research Applications

Research AreaTypical Use
Cancer BiologyEvaluation of tumour cell proliferation, apoptosis, and cell cycle arrest
EpigeneticsStudy of HDAC inhibition and histone acetylation
DNA Damage ResponseInvestigation of γH2AX accumulation and DNA repair pathways
Homologous Recombination ResearchStudy of RAD51 suppression and DNA repair inhibition
Cell Cycle StudiesAnalysis of S-phase depletion and G2 arrest
Apoptosis ResearchEvaluation of PARP cleavage, caspase activation, and ROS-dependent cell death
Angiogenesis ResearchAssessment of antiproliferative effects in endothelial cells
Lymphoma ResearchInvestigation of NF-κB-related apoptotic mechanisms

Cell Line Research Data

ParameterDetails
Cell Lines StudiedHCT116, HCT-15, BT-549, NCI-H226, CWR-22RV1, MCF-7, NCI-PC3, DLD-1, SKOV-3, OVCAR-3
SolventDMSO
Final Concentration RangeApproximately 0.0015–10 µM
Typical Exposure Time48, 72, 96, or 120 hours
Assay MethodAlamar Blue fluorometric cell proliferation assay
ReadoutGI50 determination using nonlinear regression

HDAC Activity Assay Summary

HDAC activity is commonly assessed using a continuous trypsin-coupled fluorescence assay. In this assay, HDAC enzyme preparations are incubated with Abexinostat at different concentrations, followed by addition of trypsin and fluorogenic acetylated peptide substrates.

Assay ParameterDetails
Reaction Volume100 µL
Plate Format96-well assay plate
Buffer SystemHEPES/KCl/Tween 20/DMSO, pH 7.4
Pre-Incubation15 minutes with inhibitor
DetectionFluorescence plate reader
Excitation Wavelength355 nm
Emission Wavelength460 nm
OutputReaction rate and Ki determination

In Vivo Research Summary

In mouse xenograft studies, Abexinostat has been evaluated in HCT116 and DLD-1 tumour models. Reported findings include dose-dependent tumour growth inhibition following intravenous administration.

ParameterDetails
Animal ModelFemale BALB/c nu/nu mice
Tumour ModelsHCT116 and DLD-1 xenografts
RouteIntravenous administration
Example DoseApproximately 200 mg/kg
Reported OutcomeInhibition of tumour growth in xenograft models

Technical Summary

ParameterDetails
Product NameAbexinostat
SynonymsPCI-24781, CRA-024781
Compound ClassPan-HDAC inhibitor
Primary TargetHDAC1
Primary Target ActivityKi = 7 nM
SelectivityGreater than 40-fold selectivity against HDAC8
Research AreasEpigenetics, oncology, apoptosis, DNA repair, cell cycle regulation
Solubility in StudiesDissolved in DMSO
Clinical Research StagePhase 1/2
Intended UseResearch use only

Storage and Handling Notes

Abexinostat should be handled as a research chemical by trained laboratory personnel using appropriate safety procedures.

Recommended handling considerations include:

  • Store according to supplier recommendations
  • Prepare stock solutions using suitable solvent, commonly DMSO
  • Avoid repeated freeze-thaw cycles of prepared aliquots
  • Protect compound solutions from unnecessary exposure to light and moisture
  • Use appropriate PPE, including gloves, lab coat, and eye protection
  • Dispose of compound waste according to institutional chemical safety procedures


Abexinostat / PCI-24781 / CRA-024781 is a potent pan-HDAC inhibitor with strong activity against HDAC1, HDAC2, HDAC3, HDAC6, and HDAC10. It is widely used in epigenetics and oncology research to study histone acetylation, tubulin acetylation, tumour cell growth inhibition, apoptosis, DNA damage response, RAD51-mediated homologous recombination, and cell cycle arrest. Its broad HDAC inhibition profile makes it a valuable research compound for cancer biology, chromatin regulation, and therapeutic mechanism studies.

  • Pack Size:   10mg 50mg 1g 5mg 10 mM x 1 mL in DMSO 200mg
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